2013-2009 Publications
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2013
Gaytan BD, Loguinov A, Lantz SR, Lerot JM, Denslow N, Vulpe CD (2013) Functional profiling discovers that the dieldrin organochlorinated pesticide affects leucine availability in yeast. Toxicol Sci. Jan 28. [Epub ahead of print]. PMID: 23358190. (PMC Journal – In Process). (PDF available soon).
Rappaport SM, Kim S, Thomas R, Johnson BA, Bois FY, Kupper LL (2013) Low-dose metabolism of benzene in humans: science and obfuscation. Carcinogenesis. Jan;34(1):2-9. PMID: 23222815. (PMC Journal – In Process). [PDF]
Ren X, Ji Z, Yuh J, Tang M, Bersonda J, Smith MT, Zhang L (2013) The impact of FANCD2 deficiency on formaldehyde-induced toxicity in human lymphoblastoid cell lines. Arch Toxicol. Jan;87(1):189-196. PMID: 22872141. NIHMS399462. [PDF]
Gaytán B, Loguinov A, Lantz S, Lerot JM, Denslow N, Vulpe C (2013) Functional profiling discovers that the dieldrin organochlorinated pesticide affects leucine availability in yeast. Toxicol. Sci. [Epub ahead of print: January 28, 2013]. doi: 10.1093/toxsci/kft018. PMID: 23358190. (PMC Journal – In Process). [PDF]
Zhang L, Bassig BA, Mora JL, Vermeulen R, Ge Y, Curry JD, Hu W, Shen M, Qiu C, Ji Z, Reiss B, McHale CM, Liu S, Guo W, Purdue MP, Yue F, Li L, Smith MT, Huang H, Tang X, Rothman N, Lan Q (2013) Alterations in serum immunoglobulin levels in workers occupationally exposed to trichloroethylene. Carcinogenesis. Jan16. [Epub ahead of print]. PMID: 23276795. (PMC Journal- In Progress). [PDF]
2012
Zhang L, Lan Q, Ji Z, Li G, Shen M, Vermeulen R, Guo W, Hubbard A, McHale CM, Rappaport SM, Hayes RB, Linet B, Yin S, Fraumeni JF, Rothman N, Smith MT (2012). Leukemia-related chromosomal loss detected in hematopoietic progenitor cells of benzene-exposed workers. Leukemia. Dec;26(12):2494-2498. PMCID: PMC3472034. [PDF]
Mahendra S, Grostern A, Alvarez-Cohen L (2012) The impact of chlorinated solvent co-contaminants on the biodegradation kinetics of 1,4-dioxane. Chemosphere. Dec 10;http://dx.doi.org/10.1016/j.chemosphere.2012.10.104. PMID: 23237300 (PMC Journal- In Progress). [PDF]
Pham AL, Doyle FM, Sedlak DL (2012) Kinetics and efficiency of H2O2 activation by iron-containing minerals and aquifer materials. Water Research. Dec 1;46(19):6454-6462. PMID: 23047055. (PMC Journal- In Progress). [PDF]
West KA, Lee PK, Johnson DR, Zinder SH, Alvarez-Cohen L (2012) Global gene expression of Dehalococcoides within a robust dynamic TCE-dechlorinating community under conditions of periodic substrate supply. Biotechnol Bioeng. Dec 27;doi: 10.1002/bit.24819. PMID: 23280440 (PMC Journal – In Process). [PDF]
O’Connor ST, Lan J, North M, Loguinov A, Zhang L, Smith MT, Gu A, Vulpe C (2012) Genome-wide functional and stress response profiling reveals toxic mechanism and genes required for tolerance to benzo[a]pyrene in S. cerevisiae. Front in Toxicogenomics. Dec;doi: 10.3389/fgene.2012.00316. (PMC Journal – In Process). [PDF]
Smith AH, Marshall G, Liaw J, Yuan Y, Ferreccio C, Steinmaus C (2012) Mortality in Young Adults following in Utero and Childhood Exposure to Arsenic in Drinking Water. Environ Health Perspect. Nov;120(11):1527-31. PMCID: PMC3556614. [PDF]
Yi S, Seth EC, Men YJ, Stabler SP, Allen RH, Alvarez-Cohen L, Taga ME (2012) Versatility in corrinoid salvaging and remodeling pathways supports corrinoid-dependent metabolism in Dehalococcoides mccartyi. Appl Environ Microbiol. Nov;78(21):7745-7752. PMCID: PMC3485714. [PDF]
Brisson VL, West KA, Lee PK, Tringe SG, Brodie EL, Alvarez-Cohen L (2012) Metagenomic analysis of a stable trichloroethene-degrading microbial community. ISME J. Sep 6;6(9):1702-1714. PMCID: PMC3498913. [PDF]
Pham AL, Doyle FM, Sedlak DL (2012) Dissolution of mesoporous silica supports in aqueous solutions: Implications for mesoporous silica-based water treatment processes. Applied Catalysis B: Environmental. Sep 25;126: 258-264. PMCID: PMC3465675. [PDF]
James JZ, Lucas D, Koshland CP (2012) Gold nanoparticle films as sensitive and reusable elemental mercury sensors. Environ Sci Technol. Sep 4;46(17):9557-62. PMCID: PMC3446241. [PDF]
Vermeulen R, Zhang L, Spirenburg A, Tang X, Bonventre JV, Reiss B, Shen M, Smith MT, Qui C, Ge Y, Ji Z, Xiong J, He J, Hao Z, Liu S, Xie Y, Yue F, Guo W, Purdue M, Beane-Freeman LE, Sabbisetti V, Li L, Huang H, Rothman N, Lan Q (2012) Kidney toxicity in Chinese factory workers exposed to trichloroethylene. Carcinogenesis. Aug;33(8):1538-41. PMID: 22730190. [PDF]
Phuong J, Kim S, Thomas R, Zhang L (2012) Predicted toxicity of the biofuel candidate 2,5-dimethylfuran in environmental and biological systems. Environ Mol Mutagen. Jul;53(6):478-87. PMID: 22730190. (PMC Journal – In Process). [PDF]
Thomas R, Phuong J, McHale CM, Zhang L (2012) Using bioinformatic approaches to identify pathways targeted by human leukemogens. Int J Environ Res Public Health. Jul;9(7):2479-503. PMCID: PMC3407916. [PDF]
Smith AH and Steinmaus CM (2011) Arsenic in drinking water. BMJ. May 5;342:d2248. PMID: 21546418. (PMC Journal – In Process). [PDF]
Grostern A, Sales CM, Zhuang WQ, Erbilgin O, Alvarez-Cohen L (2012) Glyoxylate metabolism is a key feature of the metabolic degradation of 1,4-dioxane by Pseudonocardia dioxanivorans strain CB1190. Appl. Environ. Microbiol. May;78(9):3298-3308. PMCID: PMC3346452. [PDF]
Ji Z, Weldon RH, Marchetti F, Chen H, Li G, Xing C, Kurtovich E, Young S, Schmid TE, Waidyanatha S, Rappaport SM, Zhang L, Eskenazi B (2012) Comparison of aneuploidies of chromosomes 21, X, and Y in the blood lymphocytes and sperm cells among workers exposed to benzene. Environ Mol Mutagen. Apr;53(3):218-26. PMID: 22351378. (PMC Journal – In Process). [PDF]
Su JG, Jerrett M, Morello-Frosch R, Jesdale BM, Kyle AD (2012) Inequalities in cumulative environmental burdens among three urbanized counties in California. Environ Int. Apr;40:79-87. PMID: 22280931. (PMC Journal – In Process). [PDF]
Smith AH, Liaw J, Steinmaus C (2012) Relationship of Creatinine and Nutrition with Arsenic Metabolism: Smith et al. Respond. Environ Health Perspect. Apr 1;120(4):a146-a147. PMCID: PMC3339472. [PDF]
Lee PK, Dill BD, Louie TS, Shah M, VerBerkmoes NC, Andersen GL, Zinder SH, Alvarez-Cohen L (2012) Global transcriptomic and proteomic responses of Dehalococcoides ethenogenes strain 195 to fixed nitrogen limitation. Appl. Environ. Microbiol. Mar;78(5):1424-36. PMCID: PMC3294477. [PDF]
Marchetti F, Eskenazi B, Weldon RH, Li G, Zhang L, Rappaport SM, Schmid TE, Xing C, Kurtovich E, Wyrobek AJ (2012) Occupational exposure to benzene and chromosomal structural aberrations in the sperm of Chinese men. Environ Health Perspect. Feb;120(2):229-34. PMCID: PMC3279447. [PDF]
Men Y, Feil H, VerBerkmoes NC, Shah MB, Johnson DR, Lee PK, West KA, Zinder SH, Andersen GL, Alvarez-Cohen L (2012) Sustainable syntrophic growth of Dehalococcoides ethenogenes strain 195 with Desulfovibrio vulgaris Hildenborough and Methanobacterium congolense: global transcriptomic and proteomic analyses. ISME J. Feb 6;6(2):410-421. PMCID: PMC3260503. [PDF]
Ji Z and Zhang L (2012) Chromosomics: Detection of numerical and structural alterations in all 24 human chromosomes simultaneously using a novel OctoChrome FISH assay. J Vis Exp. Feb;(60). Pii:3619. PMID: 22331009. (PMC Journal – In Process). [PDF]
Lee PK, Warnecke F, Brodie E, Macbeth T, Conrad ME, Andersen G, Alvarez-Cohen L (2012) Phylogenetic microarray analysis of a microbial community performing reductive dechlorination at a TCE-contaminated site. Environ. Sci. Technol. Jan 17;46(2):1044-1054. PMCID: PMC3461955. [PDF]
Holder AL, Carter, BJ, Goth-Goldstein, Lucas D, Koshland CP (2012) Increased Cytotoxicity of Oxidized Flame Soot. Atmos. Pollution Res. Jan;3(1):25-31. doi: 10.5094/APR.2012.001. (PMC Journal – In Process). [PDF]
Pham AL, Doyle FM, Sedlak DL (2102) Inhibitory Effect of Dissolved Silica on H2O2 Decomposition by Iron(III) and Manganese(IV) Oxides: Implications for H2O2-Based In Situ Chemical Oxidation. Environ. Sci. Technol. Jan 17;46(2):1055-1062. PMCID: PMC3262894. [PDF]
Godderis L, Thomas R, Hubbard AE, Tabish AM, Hoet P, Zhang L, Smith MT, Veulemans H, McHale CM (2012) Effect of Chemical Mutagens and Carcinogens on Gene Expression Profiles in Human TK6 Cells. PLoS One. 7(6):e39205. PMCID: PMC3377624. [PDF]
Babrauskas V, Lucas D, et al. (2012) Flame retardants in building insulation: a case for re-evaluating building codes. Building Research and Information. 40(6):738-755. doi: 1080/09613218.2012.744533. (PMC Journal – In Process). [PDF]
Shick SF, Farraro KF, Fang J, Nasir S, Kim J, Lucas D, Wong H, Balmes J, Giles DK, Jenkins B (2012). An Apparatus for Generating Aged Cigarette Smoke for Controlled Human Exposure Studies. Aerosol Science and Technology. 2012;46 (11):1246-1255 doi: 10.1080/02786826.2012.708947. (PMC Journal – In Process). [PDF]
Gui MH, Smuleac V, Ormsbee LE, Sedlak DL, Bhattacharyya D (2012) Iron oxide nanoparticle synthesis in aqueous and membrane systems for oxidative degradation of trichloroethylene from water. J. Nanoparticle Res. 14(5):861. doi: 10.1007/s11051-012-0861-1. (PMC Journal – In Process). [PDF]
McHale CM, Zhang L and Smith MT (2012). Current understanding of the mechanism of benzene-induced leukemia in humans: implications for risk assessment. Carcinogenesis. 33(2):240-252. PMID: 22166497. [PDF]
2011
Hosgood HD, Zhang L, Tang X, Vermeulen R, Shen M, Smith MT, Blair A, Qui C, Ge Y, Ji Z, Xiong J, He J, Reiss B, Liu S, Xie Y, Guo W, Galvan N, Li L, Hao Z, Rothman N, Huang H, Lan Q (2011) Decreased numbers of CD4+ naive and effector memory T cells, and CD8+ naïve T cells, are associated with trichloroethylene exposure. Front Oncol. 1:53. PMCID: PMC3355872. [PDF]
Zhuang WQ, Yi S, Feng X, Zinder SH, Tang YJ and Alvarez-Cohen L (2011). Selective utilization of exogenous amino acids by Dehalococcoides ethenogenes strain 195 and its effects on growth and dechlorination activity. Appl Environ Microbiol. 77(21):7797-7803. PMID: 21890673. [PDF]
Novak R, Zeng Y, Shuga J, Venugopalan G, Fletcher DA, Smith MT, Mathies RA (2011) Single cell multiplex gene detection and sequencing with microfluidically generated agarose emulsions. Angew Chem Int Ed Engl. Jan 10;50(2):390-5. PMCID: PMC3027204. [PDF]
Ren X, Lim S, Ji Z, Yuh J, Peng V, Smith MT, Zhang L (2011) Comparison of Proliferation and Genomic Instability Responses to WRN Silencing in Hematopoietic HL60 and TK6 Cells. PLoS One. Jan 18;6(1):e14546. PMCID: PMC3022623. [PDF]
Smith AH, Marshall G, Yuan Y, Liaw J, Ferreccio C, Steinmaus C (2011) Evidence from Chile that arsenic in drinking water may increase mortality from pulmonary tuberculosis. Am J Epidemiol. Feb 15;173(4):414-20. PMID: 21190988. [PDF]
Metayer C, Scélo G, Chokkalingam AP, Barcellos LF, Aldrich MC, Chang JS, Guha N, Urayama KY, Hansen HM, Block G, Kiley V, Wiencke JK, Wiemels JL, Buffler PA (2011) Genetic variants in the folate pathway and risk of childhood acute lymphoblastic leukemia. Cancer Causes Control. Sep;22(9):1243-58. PMID: 21748308. [PDF]
Does M, Scélo G, Metayer C, Selvin S, Kavet R, Buffler PA (2011) Exposure to electrical contact currents and the risk of childhood leukemia. Radiat Res. Mar;175(3):390-6. PMID: 21388283. [PDF]
Urayama KY, Ma X, Selvin S, Metayer C, Chokkalingam AP, Wiemels JL, Does M, Chang J, Wong A, Trachthenberg E, Buffler PA (2011) Early Life exposure to infections and risk of childhood acute lymphoblastic leukemia. Int J Cancer. Apr 1;128(7):1632-43. PMID: 21280034. [PDF]
Zhang L, Lan Q, Guo W, Hubbard AE, Li G, Rappaport SM, McHale CM, Shen M, Ji Z, Vermeulen R, Yin S, Rothman N, Smith MT (2011) Chromosome-Wide Aneuploidy Study (CWAS) in Workers Exposed to an Established Leukemogen, Benzene. Carcinogenesis. Apr;32(4):605-12. PMCID: PMC3066415. [PDF]
McHale CM, Zhang L, Lan Q, Vermeulen R, Li G, Hubbard AE, Porter KE, Thomas R, Portier CJ, Shen M, Rappaport SM, Yin S, Smith MT, Rothman N (2011) Global Gene Expression Profiling of a Population Exposed to a Range of Benzene Levels. Environ Health Perspect. May;119(5):628-34. PMCID: PMC3094412. [PDF]
Ren X, Aleshin M, Jo WJ, Dills R, Kalman DA, Vulpe CD, Smith MT, Zhang L (2011) Involvement of N-6 Adenine-Specific DNA Methyltransferase 1 (N6AMT1) in Arsenic Biomethylation and Its Role in Arsenic-Induced Toxicity. Environ Health Perspect. Jun;119(6):771-7. PMCID: PMC3114810. [PDF]
Lee PK, Cheng D, Hu P, West KA, Dick GJ, Brodie EL, Andersen GL, Zinder SH, He J, Alvarez-Cohen L (2011) Comparative genomics of two newly isolated Dehalococcoides strains and an enrichment using a genus microarray. ISME J. Jun;5(6):1014-24. PMCID: PMC3131851. [PDF]
Basu A, Mitra S, Chung J, Guha Mazumder DN, Ghose N, Kalman DA, von Ehrenstein OS, Steinmaus C, Liaw J, Smith AH (2011) Creatinine, Diet, Micronutrients, and Arsenic Methylation in West Bengal, India. Environ Health Perspect. Jun 7(Epub ahead of print). PMID: 21652291. [PDF]
Shen M, Zhang L, Lee KM, Vermeulen R, Hosgood HD, Li G, Yin S, Rothman N, Chanock S, Smith MT, Lan Q (2011) Polymorphisms in genes involved in innate immunity and susceptibility to benzene-induced hematotoxicity. Exp mol Med. Jun 30;43(6):374-8. PMCID: PMC3128916. [PDF]
Smith MT, Zhang L, McHale CM, Skibola CF, Rappaport SM (2011) Benzene, the exposome and future investigations of leukemia etiology. Chem Biol Interact. Jun 30;192(1-2):155-9. PMID: 21333640. [PDF]
Chang JS, Zhou M, Buffler PA, Chokkalingam AP, Metayer C, Wiemels JL (2011) Profound Deficit of IL10 at Birth in Children Who Develop Childhood Acute Lymphoblastic Leukemia. Cancer Epidemiol Biomarkers Prev. Aug;20(8):1736-40. PMID: 21653647. [PDF]
North M, Tandon VJ, Thomas R, Loguinov A, Gerlovina I, Hubbard AE, Zhang L, Smith MT, Vulpe CD (2011) Genome-Wide Functional Profiling Reveals Genes Required for Tolerance to Benzene Metabolites in Yeast. PLoS ONE. Aug 30;6(8): e24205. PMCID: PMC3166172. [PDF]
2010
Robrock KR, Mohn WW, Eltis LD, Alvarez-Cohen L (2010) Biphenyl and ethylbenzene dioxygenases of Rhodococcus jostii RHA1 transform PBDEs. Biotechnol Bioeng. Feb;108(2):313-21. PMID 20872819. [PDF]
Rappaport SM, Smith MT (2010) Environment and disease risks. Science. Oct 22. 330(6003):460-1. PMID: 20966241. [PDF]
Bartley K, Metayer C, Selvin S, Ducore J, Buffler PA (2010) Diagnostic X-rays and risk of childhood leukemia. Int J Epidemiol. Dec;39(6):1628-37. PMID: 20889538. [PDF]
North M, Vulpe, CD (2010) Functional toxicogenomics: Mechanism-centered Toxicology. Int J Mol Sci. Nov 22;11(12):4796-813. [PDF]
Ji Z, Zhang L, Peng V, Ren X, McHale CM, Smith MT (2010) A comparison of the cytogenetic alterations and global DNA hypomethylation induced by the benzene metabolite, hydroquinone, with those induced by melphalan and etoposide. Leukemia. May;24(5):986-91. PMID: 20339439. [PDF]
Steinmaus C, Smith AH, Smith MT (2010) Regarding “Meta-analysis and Causal Inference: A Case Study of Benzene and Non-Hodgkin Lymphoma”: An Incomplete Analysis. Ann Epidemiol. Aug 11. [Epub ahead of print] PMID: 20705482. [PDF]
Porter KE, Basu A, Hubbard AE, Bates MN, Kalman D, Rey O, Smith A, Smith MT, Steinmaus C, Skibola CF (2010) Association of genetic variation in cystathionine-beta-synthase and arsenic metabolism. Environ Res. Aug;110(6):580-7. PMCID: PMC2913479. [PDF]
Steinmaus C, Yuan Y, Kalman D, Rey OA, Skibola CF, Dauphine D, Basu A, Porter KE, Hubbard A, Bates MN, Smith MT, Smith AH (2010) Individual differences in arsenic metabolism and lung cancer in a case-control study in Cordoba, Argentina. Toxicol Appl Pharmacol. Sep 1;247(2):138-45. PMID: 20600216. [PDF]
Lan Q, Zhang L, Tang X, Shen M, Smith MT, Qiu C, Ge Y, Ji Z, Xiong J, He J, Reiss B, Hao Z, Liu S, Xie Y, Guo W, Purdue M, Galvan N, Xin KX, Hu W, Freeman LE, Blair A, Li L, Rothman N, Vermeulen R, Huang H (2010) Occupational exposure to trichloroethylene is associated with a decline in lymphocyte subsets and soluble CD27 and CD30 markers. Carcinogenesis. Sep;31(9):1592-6. PMCID: PMC2930801. [PDF]
Schwilk E, Zhang L, Smith MT, Smith AH, Steinmaus C (2010) Formaldehyde and leukemia: an updated meta-analysis and evaluation of bias. J Occup Environ Med. Sep;52(9):878-86. PMID: 20798648. [PDF]
Wiemels JL, Kang M, Chang JS, Zheng L, Kouyoumji C, Zhang L, Smith MT, Scelo G, Metayer C, Buffler P, Wiencke JK (2010) Backtracking RAS mutations in high hyperdiploid childhood acute lymphoblastic leukemia. Blood Cells Mol Dis. Oct 15;45(3):186-91. PMCID: PMC2943008. [PDF]
Ward EM, Schulte PA, Straif K, Hopf NB, Caldwell JC, Carreón T, Demarini DM, Fowler BA, Goldstein BD, Hemminki K, Hines CJ, Pursiainen KH, Kuempel E, Lewtas J, Lunn RM, Lynge E, McElvenny DM, Muhle H, Nakajima T, Robertson LW, Rothman N, Ruder AM, Schubauer-Berigan MK, Siemiatycki J, Silverman D, Smith MT, Sorahan T, Steenland K, Stevens RG, Vineis P, Zahm SH, Zeise L, Cogliano VJ (2010) Research recommendations for selected IARC-classified agents. Environ Health Perspect. Oct;118(10):1355-62. PMCID: PMC2957912. [PDF]
Shuga J, Zeng Y, Novak R, Mathies R, Hainaut P, Smith MT (2010) Selected technologies for measuring acquired genetic damage in humans. Environmental and Molecular Mutagenesis. Oct;51(8-9):851-70. PMID: 20872848. [PDF]
Ren X, McHale CM, Skibola CF, Smith AH, Smith MT, Zhang L (2010) An emerging role for epigenetic dysregulation in arsenic toxicity and carcinogenesis. EHP. Aug 2 [Epub ahead of print]. doi: 10.1289/ehp.1002114. [PDF]
McHale, CM, Zhang L, Hubbard AE, Smith MT (2010) Toxicogenomic profiling of chemically exposed humans in risk assessment. Mutat Res. Apr 9. [Epub ahead of print]. PMCID: PMC2928857. [PDF]
Rappaport SM, Kim S, Lan Q, Li G, Vermeulen R, Waidyanatha S, Zhang L, Yin S, Smith MT and Rothman N (2010) Human benzene metabolism following occupational and environmental exposures. Chem Biol Interact, 184(1-2):189-95. PMID: 20026321 [PDF]
Smith MT (2010) Advance in Understanding Benzene Health Effects and Susceptibility. Annu. Rev. Public Health, 31:133-48. [PDF]
Xing C MF, Li G, Weldon RH, Kurtovich E, Young S, Schmid TE, Zhang L, Rappaport S, Waidyanatha S, Wyrobek AJ, Eskenazi B (2010) Benzene exposure near the u.s. Permissible limit is associated with sperm aneuploidy. Environ Health Prospect, 118(6):833-9. PMID: 20418200 [PDF]
Zhang L, McHale CM, Rothman N, Li G, Ji Z, Vermeulen R, Hubbard AE, Ren X, Shen M, Rappaport SM, North M, Skibola CF, Yin S, Vulpe C, Chanock SJ and Smith MT (2010) Systems Biology of Human Benzene Exposure. Chem Biol Interact, 184(1-2):86-93. PMID: 20026094 [PDF]
Zhang L, Tang X, Rothman N, Vermeulen R, Ji Z, Shen M, Qiu C, Guo W, Liu S, Reiss B, Beane Freeman LE, Ge Y, Hubbard AE, Huang M, Blair A, Galvan N, Ruan X, Alter BP, Xin KX, Li S, Moore LE, Kim S, Xie Y, Hayes RB, Azuma M, Hauptmann SM, Xiong J, Stewart P, Li L, Rappaport SM, Huang H, Fraumeni JF, Smith MT and Lan Q (2010) Occupational Exposure to Formaldehyde, Hematotoxicity, and Leukemia-Specific Chromosome Changes in Cultured Myeloid Progenitor Cells. Cancer Epidemiol Biomarkers Prev, 19(1):80-88. [PDF]
Mulvihill M, Ling X, Heinzie J, Yang P (2010) Anisotropic etching of silver nanoparticles for plasmonic structures capable of single-particle SERS. J Am Chem Soc. Jan 13;132(1):268-74. PMID: 20000421. [PDF]
Zhang L, Freeman LE, Nakamura J, Hecht SS, Vandenberg JJ, Smith MT, Sonawane BR (2010) Formaldehyde and leukemia: Epidemiology, potential mechanisms, and implications for risk assessment. Environ Mol Mutagen. Apr; 51(3):181-191. PMID: 19790261. PMCID: PMC2839060. [PDF]
Rappaport SM, Kim S, Lan Q, Li G, Vermeulen R, Waidyanatha S, Zhang L, Yin S, Smith MT, Rothman N (2010) Human benzene metabolism following occupational and environmental exposures. Chem Biol Interact. Mar 19;184(1-2):189-95. PMID: 20026321. PMC – Journal in Progress. [PDF]
Zhang L, McHale CM, Rothman N, Li G, Ji Z, Vermeulen R, Hubbard AE, Ren X, Shen M, Rappaport SM, North M, Skibola CF, Yin S, Vulpe C, Chanock SJ, Smith MT, Lan Q (2010) Systems biology of human benzene exposure. Chem Biol Interact. Mar 19;184(1-2):86-93. PMID: 20026094. PMCID: PMC2846187. [PDF]
Zhang L, Tang X, Rothman N, Vermeulen R, Ji Z, Shen M, Qiu C, Guo W, Liu S, Reiss B, Freeman LB, Ge Y, Hubbard AE, Hua M, Blair A, Galvan N, Ruan X, Alter BP, Xin KX, Li S, Moore LE, Kim S, Xie Y, Hayes RB, Azuma M, Hauptmann M, Xiong J, Stewart P, Li L, Rappaport SM, Huang H, Fraumeni JF Jr, Smith MT, Lan Q (2010) Occupational Exposure to Formaldehyde, Hematotoxicity, and Leukemia-Specific Chromosome Changes in Cultured Myeloid Progenitor Cells. Cancer Epidemiol Biomarkers Prev. Jan;19(1):80-88. PMID: 20056626. PMC Journal – In Process. [PDF]
Yuan Y, Marshall G, Ferreccio C, Steinmaus C, Liaw J, Bates M, Smith AH (2010) Kidney cancer mortality: fifty-year latency patterns related to arsenic exposure. Epidemiology. Jan; 21(1):103-8. PMID: 20010213. PMC – Journal in Progress. [PDF]
Lightfoot TJ, Johnston WT, Painter D, Simpson J, Roman E, Skibola CF, Smith MT, Allan JM, Taylor GM (2010) Genetic variation in the folate metabolic pathway and risk of childhood leukemia. Blood. Jan 25; PMID: 20101025. PMC – Journal in Progress. [PDF]
Lightfoot TJ, Roman E, Smith MT, Skibola CF (2010) Acute lymphoblastic leukaemia in children – is there a role for MTHFR? Br J Haematol. Feb 8; PMID: 20148884. PMC – Journal in Progress. [PDF]
Vlaanderen J, Moore LE, Smith MT, Lan Q, Zhang L, Skibola CF, Rothman N, Vermeulen R (2010) Application of omics technologies in occupational and environmental health research; Current status and projections. Occup Environ Med. Feb; 67(2):136-43. PMID: 19933307. PMC – Journal in Progress. [PDF]
Smith MT (2010) Advances in Understanding Benzene Health Effects and Susceptibility. Annu Rev Public Health. Apr 21;31:133-48. PMID: 20070208. PMC – Journal in Progress. [PDF]
2009
Robrock KR, Coelhan M, Sedlak DL, Alvarez-Cohent L (2009) Aerobic biotransformation of polybrominated diphenyl ethers (PBDEs) by bacterial isolates. Environ Sci Technol. Aug 1; 43(15):5705-11. PMID: 19731666. [PDF]
Steinmaus C, Yuan Y, Liaw J, Smith AH (2009) On Arsenic, Diabetes, Creatinine, and Multiple Regression Modeling: A Response to the Commentaries on Our Reanalysis. Epidemiology. 20(6):e1-e2. [PDF]
Lee C, Sedlak DL (2009) A novel homogeneous Fenton-like system with Fe(III)-phosphotungstate for oxidation of organic compounds at neutral pH values. J Molec Catal A. 311(1-2):1-6. NIHMS131170. [PDF]
Lan Q, Zhang L, Shen M, Jo WJ, Vermeulen R, Li G, Vulpe C, Lim S, Ren X, Rappaport SM, Berndt SI, Yeager M, Yuenger J, Hayes RB, Linet M, Yin S, Chanock S, Smith MT, Rothman N (2009) Large-scale evaluation of candidate genes identifies associations between DNA repair and genomic maintenance and development of benzene hematotoxicity. Carcinogenesis. Jan; 30(1):50-8. PMID: 18978339. PMCID: PMC2639030. [PDF]
Scelo G, Metayer C, Zhang L, Wiemels JL, Aldrich MC, Selvin S, Month S, Smith MT, Buffler PA (2009) Household exposure to paint and petroleum solvents, chromosomal translocations, and the risk of childhood leukemia. Environ Health Perspect. Jan; 117(1):133-9. PMID: 19165400. PMCID: PMC2627857. [PDF]
Ren X, Lim S, Smith MT, Zhang L (2009) Werner syndrome protein, WRN, protects cells from DNA damage induced by the benzene metabolite hydroquinone. Toxicol Sci. Feb; 107(2):367-75. PMID: 19064679. PMCID: PMC2639759. [PDF]
Rahman A, Vahter M, Smith AH, Nermell B, Yunus M, El Arifeen S, Persson LA, Ekstrom EC (2009) Arsenic exposure during pregnancy and size at birth: a prospective cohort study in Bangladesh. Am J Epidemiol. Feb 1; 169(3):304-12. PMID: 19037006. [PDF]
Jo WJ, Kim JH, Oh E, Jaramillo D, Holman P, Loguinov AV, Arkin AP, Nislow C, Giaever G, Vulpe CD (2009) Novel insights into iron metabolism by integrating deletome and transcriptome analysis in an iron deficiency model of the yeast Saccharomyces cerevisiae. BMC Genomics. Mar 25;10:130. PMID: 19321002. PMCID: PMC2669097. [PDF]
Zhang L, Steinmaus C, Eastmond DA, Xin XK, Smith MT (2009) Formaldehyde exposure and leukemia: a new meta-analysis and potential mechanisms. Mutat Res. Mar-Jun; 681(2-3):150-68. PMID: 18674636. [PDF]
Guyton KZ, Kyle AD, Aubrecht J, Cogliano VJ, Eastmond DA, Jackson M, Keshava N, Sandy MS, Sonawane B, Zhang L, Waters MD, Smith MT (2009) Improving prediction of chemical carcinogenicity by considering multiple mechanisms and applying toxicogenomic approaches. Mutat Res. Mar-Jun; 681(2-3):230-40. PMID: 19010444. [PDF]
Smith AH, Steinmaus CM (2009) Health effects of arsenic and chromium in drinking water: recent human findings. Annu Rev Public Health. Apr 29; 30(107-22. PMID: 19012537. PMCID: PMC2762382. [PDF]
Galush WJ, Shelby SA, Mulvihill MJ, Tao A, Yang PD, Groves JT (2009) A Nanocube Plasmonic Sensor for Molecular Binding on Membrane Surfaces. Nano Letters. May; 9(5):2077-2082. PMID: 19385625. [PDF]
Johnson DR, Nemir A, Andersen GL, Zinder SH, Alvarez-Cohen L (2009) Transcriptomic microarray analysis of corrinoid responsive genes in Dehalococcoides ethenogenes strain 195. FEMS Microbiol Lett. May; 294(2):198-206. PMID: 19341394. [PDF]
Whitehead T, Metayer C, Ward MH, Nishioka MG, Gunier R, Colt JS, Reynolds P, Selvin S, Buffler P, Rappaport SM (2009) Is house-dust nicotine a good surrogate for household smoking? Am J Epidemiol. May 1; 169(9):1113-23. PMID: 19299402. PMCID: PMC2727236. [PDF]
Smith AH, Ercumen A, Yuan Y, Steinmaus CM (2009) Increased lung cancer risks are similar whether arsenic is ingested or inhaled. J Expo Sci Environ Epidemiol. May; 19(4):343-8. PMID: 19190673. PMCID: PMC2682945. [PDF]
Ward MH, Colt JS, Metayer C, Gunier RB, Lubin J, Crouse V, Nishioka MG, Reynolds P, Buffler PA (2009) Residential exposure to polychlorinated biphenyls and organochlorine pesticides and risk of childhood leukemia. Environ Health Perspect. Jun; 117(6):1007-13. PMID: 19590698. PMCID: PMC2702395. [PDF]
Rappaport SM, Kim S, Lan Q, Vermeulen R, Waidyanatha S, Zhang L, Li G, Yin S, Hayes RB, Rothman N, Smith MT (2009) Evidence That Humans Metabolize Benzene via Two Pathways. Environ Health Perspect. Jun; 117(6):946-52. PMID: 19590688. PMCID: PMC2702411. [PDF]
Keenan CR, Goth-Goldstein R, Lucas D, Sedlak DL (2009) Oxidative stress induced by zero-valent iron nanoparticles and Fe(II) in human bronchial epithelial cells. Environ Sci Technol. Jun 15; 43(12):4555-60. PMID: 19603676. [PDF]
Ji Z, Zhang L, Guo W, McHale CM, Smith MT (2009) The benzene metabolite, hydroquinone and etoposide both induce endoreduplication in human lymphoblastoid TK6 cells. Mutagenesis. Jul; 24(4):367-72. PMID: 19491217. PMCID: PMC2701990. [PDF]
Zhuang WQ, Yi S, Tang YJ, Zinder SH, Keasling JD, Alvarez-Cohen L (2009) Investigation of Carbon Metabolism in “Dehalococcoides ethenogenes” strain 195 Using Isotopomer and Transcriptomic Analyses. J. Bacteriol. Aug;191(16):5224-31. PMCID: PMC2725585. [PDF]
Chang JS, Buffler PA, Metayer C, Chokkalingam AP, Patoka J, Kronish D, Wiemels JL (2009) Maternal immunoglobulin E and childhood leukemia. Cancer Epidemiol Biomarkers Prev. Aug; 18(8):2221-7. PMID: 19622720. [PDF]
Tang YJ, Yi S, Zhuang WQ, Zinder SH, Keasling JD, Alvarez-Cohen L (2009) Investigation of carbon metabolism in “Dehalococcoides ethenogenes” strain 195 by use of isotopomer and transcriptomic analyses. J Bacteriol. Aug; 191(16):5224-31. PMID: 19525347. PMCID: PMC2725585. [PDF]
Smith MT, Rappaport SM (2009) Building Exposure Biology Centers to Put the E into “G × E” Interaction Studies. Environ Health Perspect. Aug;117(8):A334-5. PMID: PMID: 19672377. PMCID: PMC2721881. [PDF]
Johnson BE, Esser BK, Whyte DC, Ganguli PM, Austin CM, Hunt JR (2009) Mercury accumulation and attenuation at a rapidly forming delta with a point source of mining waste. Sci Total Environ. Sep 1; 407(18):5056-70. PMID: 19539980. PMCID: PMC2747606. [PDF]
Jo WJ, Loguinov A, Wintz H, Chang M, Smith AH, Kalman D, Zhang L, Smith MT, Vulpe CD (2009) Comparative functional genomic analysis identifies distinct and overlapping sets of genes required for resistance to monomethylarsonous acid (MMAIII) and arsenite (AsIII) in yeast. Toxicol Sci. Oct; 111(2):424-36. PMID: 19635755. PMCID: PMC2742584. [PDF]
Steinmaus C, Yuan Y, Liaw J, Smith AH (2009) Low-level population exposure to inorganic arsenic in the united states and diabetes mellitus: a reanalysis. Epidemiology. Nov; 20(6):807-15. PMID: 19652600. [PDF]
Tang X, Bai Y, Duong A, Smith MT, Li L, Zhang L (2009) Formaldehyde in China: production, consumption, exposure levels, and health effects. Environ Int. Nov; 35(8):1210-24. PMID: 19589601. PMC – Journal in Progress. [PDF]
Urayama KY, Von Behren J, Reynolds P, Hertz A, Does M, Buffler PA (2009) Factors associated with residential mobility in children with leukemia: implications for assigning exposures. Ann Epidemiol. Nov; 19(11):834-40. PMID: 19364662. PMCID: PMC2761989. [PDF]
Hosgood HD, 3rd, Zhang L, Shen M, Berndt SI, Vermeulen R, Li G, Yin S, Yeager M, Yuenger J, Rothman N, Chanock S, Smith M, Lan Q (2009) Association between genetic variants in VEGF, ERCC3 and occupational benzene haematotoxicity. Occup Environ Med. Dec; 66(12):848-53. PMID: 19773279. [PDF]
Lee PK, He J, Zinder SH, Alvarez-Cohen L (2009) Evidence for nitrogen fixation by “Dehalococcoides ethenogenes” strain 195. Appl Environ Microbiol. Dec; 75(23):7551-5. PMID: 19820162. PMCID: PMC2786412 s. [PDF]
Pham AL, Lee C, Doyle FM, Sedlak DL (2009) A silica-supported iron oxide catalyst capable of activating hydrogen peroxide at neutral pH values. Environ Sci Technol. Dec 1; 43(23):8930-5. PMID: 19943668. PMCID: PMC2792909. [PDF]
Jo WJ, Ren X, Chu F, Aleshin M, Wintz H, Burlingame A, Smith MT, Vulpe CD, Zhang L (2009) Acetylated H4K16 by MYST1 protects UROtsa cells from arsenic toxicity and is decreased following chronic arsenic exposure. Toxicol Appl Pharmacol. Dec 15; 241(3):294-302. PMID: 19732783. PMCID: PMC2784148. [PDF]
Whitehead T, Metayer C, Gunier RB, Ward MH, Nishioka MG, Buffler P, Rappaport SM (2009) Determinants of polycyclic aromatic hydrocarbon levels in house dust. J Expo Sci Environ Epidemiol. Dec 30; PMID: 20040932. PMC – Journal in Progress. [PDF]
McHale CM, Zhang L, Lan Q, Li G, Hubbard AE, Forrest MS, Vermeulen R, Chen J, Shen M, Rappaport SM, Yin S, Smith MT, Rothman N (2009) Changes in the peripheral blood transcriptome associated with occupational benzene exposure identified by cross-comparison on two microarray platforms. Genomics. Apr; 93(4):343-349. PMID: 19162166. PMCID: PMC2693268. [PDF]